Protocol

Quick Endotoxin Removal Protocol

Products

BcMag™ Quick Endotoxin Removal Kit
[Kit components]
2 ml: Quick Endotoxin Removal Magnetic Beads
10 ml: 10x Regeneration Buffer


Cat. No.  MKE101

Unit Size  2ml kit
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BcMag™ Quick Endotoxin Removal Magnetic Beads
Cat. No.  MKE102

Unit Size  5 ml
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10x Regeneration Buffer
Cat. No.  MKE103

Unit Size  20 ml
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Cat. No.

Product Name

Unit Size

Order

MKE101

BcMag™ Quick Endotoxin Removal Kit
Kit components:
2 ml: Quick Endotoxin Removal Magnetic Beads
10 ml: 10x Regeneration Buffer

2ml kit

MKE102

BcMag™ Quick Endotoxin Removal Magnetic Beads

5 ml

MKE103

10x Regeneration Buffer

20 ml

Specification

Composition

Magnetic microsphere immobilized with Polymyxin B

Magnetization

~60 EMU/g

Type of Magnetization

Superparamagnetic

Effective Density

2.5 g/ml

Concentration

50 mg/ml (dH2O)

Binding Capacity

≥ 9,995 EU (endotoxin units) / ml

Storage

Ship at room temperature, Store at 4°C upon receipt

Introduction

Endotoxins, also known as lipopolysaccharides, are a puzzling type of pyrogen. Their molecular structure is made up of hydrophobic fatty acid groups and hydrophilic polysaccharides, giving rise to a distinct inner core and outer region. These toxins are primarily found in the outer membranes of gram-negative bacteria such as Salmonella, E. coli, Shigella, Pseudomonas, Neisseria, Haemophilus influenzae, Bordetella pertussis, and Vibrio cholera.

When bacteria are disrupted, endotoxins are released into the environment, causing harm to the biological system. Unfortunately, endotoxins are frequently found in commercial biological products, which has a negative impact on the intended research. In the biotechnology industry, Gram-negative bacteria are commonly used to produce recombinant products such as proteins, plasmid DNAs, and vaccines, which can be contaminated with endotoxins at any stage of the process.

Endotoxins must be removed from these products because their presence can result in several pathophysiological effects such as fever, shaking chills, septic shock, toxic pneumonitis, and lethality from respiratory symptoms. The BcMag™ Quick Endotoxin Removal Kit is a novel solution that efficiently removes endotoxins via magnetic microspheres covalently immobilized with a high density of polymyxin B. Polymyxin B, a peptide antibiotic, has a high affinity for the lipid A moiety of most endotoxins.

Endotoxin structure

Workflow

The purification with magnetic microparticles is straightforward.

1.

Mix the microparticles with the sample and incubate them with continuous rotation for a sufficient time. During mixing, the beads remain suspended in the sample solution, allowing the endotoxins to bind to the immobilized polymyxin B.

2.

After incubation, the beads are collected and separated from the sample using a magnet rack. Transfer the endotoxin-free supernatant to a fresh tube.

Endotoxin removal workflow

PROTOCOL

Materials Required

Regeneration Buffer: 1% Sodium deoxycholate

Endotoxin-free dH2O

Magnetic rack (for manual operation)

Based on sample volume, the user can choose one of the following magnetic Racks:

– BcMag magnetic rack-2 for holding two individual 1.5 ml centrifuge tubes (Cat. No. MS-01);

– BcMag magnetic rack-6 for holding six individual 1.5 ml centrifuge tubes (Cat. No. MS-02);

– BcMag magnetic rack-24 for holding twenty-four individual 1.5-2.0 ml centrifuge tubes (Cat. No. MS-03);

– BcMag magnetic rack-50 for holding one 50 ml centrifuge tube, one 15 ml centrifuge tube, and four individual 1.5 ml centrifuge tubes (Cat. No. MS-04);

– BcMag™ magnetic rack-96 for holding a 96 ELISA plate or PCR plate (Cat. No. MS-05).

For larger scale purification, Ceramic magnets Block for large scale purification ( 6 in x 4 in x 1 in block ferrite magnet, Applied Magnets, Cat. No. CERAMIC-B8).

A. Procedure

Note:

Equilibrate all reagents and samples to room temperature because temperature, pH, and ionic strength affect the performance of the Particles.

To minimize nonspecific binding, adjust all buffers to pH 7-8 and salt concentration 0.1-0.5 M NaCl (final concentration), although the Particles can bind to LPS at pH 5-9.

Use only endotoxin-free solutions to prevent introducing any endotoxin into the sample.

1.

Vigorously shake the bottle until the magnetic beads become homogeneous and transfer an appropriate volume of the magnetic to a new tube or flask.

Note:

  • Optimize the number of beads used for each application. Do not allow the beads to sit for more than 3 minutes before dispensing. Resuspend the magnetic

2.

Place the tube on the magnetic rack for 1-3 minutes until the supernatant becomes clear. Remove the supernatant while the tube remains on the rack.

3.

Add ten particle-bed volumes of endotoxin-free dH2O and mix the particles by pipetting or vortex. Again place the tube on the magnetic rack for 1-3 minutes and remove the supernatant while the tube remains on the rack.

4.

Repeat step (3) one more time.

5.

Resuspend the particles with ten particle-bed volumes of regeneration buffer and incubate at room temperature for 15 minutes with continuous rotation.

6.

Wash the particles with F particle volumes of a suitable endotoxin-free buffer or dH2O three times as described in step (2).

7.

Add an appropriate amount of protein or DNA solution to the particles and incubate at room temperature for 15 minutes with continuous rotation.

8.

Place the tube on the magnetic rack for 1-3 minutes until the supernatant becomes clear. Remove the supernatant to an endotoxin-free tube while the tube remains on the rack.

B. Particles Reuse

Note:

For the same protein or DNA, it is possible to reuse the particles.

Regenerated particles may be used at least 5 times without loss of activity.

The Particles must be regenerated before each use, including first-time use.

1.

Regenerate particles by washing the particles with five particle-bed volumes of regeneration buffer three times to remove any bound endotoxin as described in step A(2).

2.

Wash the particles with five particle-bed volumes of endotoxin-free dH2O three times as described in step A (2).

3.

Store the particles in 20-25% ethanol at 2-8°C.

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